STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC14265.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (73 aa)    
Predicted Functional Partners:
ALC14271.1
Conjugal transfer protein TrbJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.922
ALC14269.1
Conjugal transfer protein TrbL; Type IV secretion VirB6 family; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.889
ALC14268.1
Conjugal transfer protein TrbF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.874
ALC14266.1
Conjugal transfer protein TraI; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.839
ALC14273.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.835
ALC14267.1
Type IV secretion system protein VirB9; Product name was assigned by KAAS; K03204.
 
   
 0.813
ALC14270.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.779
ALC14272.1
Conjugal transfer protein TrbE; Type IV secretion system VirB4 family; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.779
ALC14274.1
Conjugal transfer protein TrbC; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.779
ALC14275.1
Conjugal transfer protein TrbB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.779
Your Current Organism:
Sphingopyxis sp. 113P3
NCBI taxonomy Id: 292913
Other names: S. sp. 113P3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.