STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC14351.1RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (202 aa)    
Predicted Functional Partners:
ALC14350.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.779
ALC14354.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.649
ALC14352.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.633
ALC14353.1
Hypothetical protein; Identified by MetaGeneAnnotator.
       0.625
ALC14349.1
Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
     
 0.560
ALC14348.1
Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
     
 0.554
ALC14347.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.546
ALC14214.1
Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.486
ALC14346.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.456
ALC14355.1
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
       0.452
Your Current Organism:
Sphingopyxis sp. 113P3
NCBI taxonomy Id: 292913
Other names: S. sp. 113P3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.