STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALC14374.1Glycosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (168 aa)    
Predicted Functional Partners:
ALC14375.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.947
ALC14373.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.933
ALC14372.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.886
ALC14376.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.859
ALC14370.1
Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.848
ALC14368.1
CopG family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.833
ALC14378.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.813
ALC10680.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.778
ALC11404.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.774
ALC14279.1
CopG domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.772
Your Current Organism:
Sphingopyxis sp. 113P3
NCBI taxonomy Id: 292913
Other names: S. sp. 113P3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.