Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CD943_04925 | CD943_04930 | GCA_000988015_01177 | GCA_000988015_01176 | Unannotated protein. | Unannotated protein. | 0.966 |
CD943_04925 | dnaX | GCA_000988015_01177 | GCA_000988015_02309 | Unannotated protein. | Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.798 |
CD943_04925 | polA | GCA_000988015_01177 | GCA_000988015_01496 | Unannotated protein. | Unannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.540 |
CD943_04925 | rnhA | GCA_000988015_01177 | GCA_000988015_01066 | Unannotated protein. | Unannotated protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.664 |
CD943_04925 | ssb | GCA_000988015_01177 | GCA_000988015_01765 | Unannotated protein. | Unannotated protein. | 0.900 |
CD943_04925 | topA | GCA_000988015_01177 | GCA_000988015_00735 | Unannotated protein. | Unannotated protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.669 |
CD943_04930 | CD943_04925 | GCA_000988015_01176 | GCA_000988015_01177 | Unannotated protein. | Unannotated protein. | 0.966 |
CD943_04930 | dnaX | GCA_000988015_01176 | GCA_000988015_02309 | Unannotated protein. | Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.898 |
CD943_04930 | polA | GCA_000988015_01176 | GCA_000988015_01496 | Unannotated protein. | Unannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.540 |
CD943_04930 | rnhA | GCA_000988015_01176 | GCA_000988015_01066 | Unannotated protein. | Unannotated protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.664 |
CD943_04930 | ssb | GCA_000988015_01176 | GCA_000988015_01765 | Unannotated protein. | Unannotated protein. | 0.900 |
CD943_04930 | topA | GCA_000988015_01176 | GCA_000988015_00735 | Unannotated protein. | Unannotated protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.680 |
dnaQ | dnaX | GCA_000988015_02660 | GCA_000988015_02309 | Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.986 |
dnaQ | polA | GCA_000988015_02660 | GCA_000988015_01496 | Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | Unannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.581 |
dnaQ | rnhA | GCA_000988015_02660 | GCA_000988015_01066 | Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | Unannotated protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.921 |
dnaX | CD943_04925 | GCA_000988015_02309 | GCA_000988015_01177 | Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | Unannotated protein. | 0.798 |
dnaX | CD943_04930 | GCA_000988015_02309 | GCA_000988015_01176 | Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | Unannotated protein. | 0.898 |
dnaX | dnaQ | GCA_000988015_02309 | GCA_000988015_02660 | Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.986 |
dnaX | guaB | GCA_000988015_02309 | GCA_000988015_00860 | Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.445 |
dnaX | polA | GCA_000988015_02309 | GCA_000988015_01496 | Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | Unannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.553 |
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