Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ODR12180.1phytanoyl-CoA dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (283 aa)    
Predicted Functional Partners:
ODR12239.1
Cutinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.756
ODR15237.1
Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.613
ODR14858.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.577
ODR14967.1
Gamma-butyrobetaine; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.560
ODR14595.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.538
ODR13102.1
Phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.517
guaA
Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.516
ODR08368.1
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.498
ODR12181.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.479
ODR15168.1
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.478
Your Current Organism:
Mycobacterium shimoidei
NCBI taxonomy Id: 29313
Other names: ATCC 27962, CCUG 37517, DSM 44152, JCM 12376, M. shimoidei, strain E4796
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.