STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORV72040.1General stress protein CsbD; Derived by automated computational analysis using gene prediction method: Protein Homology. (79 aa)    
Predicted Functional Partners:
ORV70607.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.588
ORV66230.1
F420-dependent protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.542
ORV70378.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.542
ORV67007.1
Pyridoxine 5'-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.542
ORV70427.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.529
ORV72071.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.525
ORV66995.1
NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.507
ORV72041.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.483
ORV70952.1
TspO protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.449
ORV72042.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.444
Your Current Organism:
Mycolicibacter hiberniae
NCBI taxonomy Id: 29314
Other names: ATCC 49874, ATCC 9874, CIP 104537, DSM 44241, JCM 13571, M. hiberniae, Mycobacterium hiberniae, Mycobacterium hiberniense, strain Hi 11
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.