Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAT86399.1Nitrogen fixation protein NifU. (150 aa)    
Predicted Functional Partners:
GAT86400.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 0.997
GAT85986.1
Cysteine desulfarase.
  
 0.990
GAT86199.1
Cysteine desulfarase.
  
 0.990
GAT86081.1
Cysteine desulfurase.
 
 0.989
GAT86749.1
Metal-sulfur cluster biosynthetic enzyme.
  
 0.988
GAT86748.1
Iron ABC transporter ATP-binding protein.
 
 
 0.987
GAT89408.1
Cysteine desulfurase.
 
 0.976
GAT89397.1
Hypothetical protein.
 
 0.975
GAT86746.1
ABC transporter permease.
 
 
 0.971
GAT86867.1
Hypothetical protein; Belongs to the HesB/IscA family.
 
 
 0.970
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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