STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT86607.1GntR family transcriptional regulator. (257 aa)    
Predicted Functional Partners:
GAT86862.1
GntR family transcriptional regulator.
  
     0.696
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
    
  0.694
GAT85970.1
GntR family transcriptional regulator.
  
     0.683
GAT89800.1
GntR family transcriptional regulator.
  
     0.629
GAT86539.1
GntR family transcriptional regulator.
  
     0.610
GAT86606.1
Major facilitator transporter.
 
     0.583
GAT86605.1
Nucleoside hydrolase.
 
     0.496
GAT86139.1
N-acetylglucosamine 6-phosphate deacetylase.
 
  
 0.451
GAT88978.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
   
    0.443
GAT87161.1
Hypothetical protein.
  
    0.413
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.