Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAT86613.1Glycosidase. (302 aa)    
Predicted Functional Partners:
glgB
Glycogen-branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 0.899
GAT87401.1
Trehalose phosphatase.
  
 
 0.735
GAT88506.1
Kojibiose phosphorylase.
  
 
 0.721
GAT89337.1
Kojibiose phosphorylase.
  
 
 0.721
GAT87563.1
Hypothetical protein.
  
 0.663
GAT85352.1
XRE family transcriptional regulator.
  
     0.650
GAT87450.1
Alpha integrin.
  
     0.644
GAT86403.1
LuxR family transcriptional regulator.
  
     0.558
GAT86612.1
Acylphosphatase.
       0.538
GAT88756.1
Membrane protein.
  
     0.523
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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