Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
GAT86657.1Multidrug ABC transporter ATPase. (577 aa)    
Predicted Functional Partners:
GAT87389.1
ABC transporter.
 
   
 
0.960
GAT87416.1
Hypothetical protein.
 
   
 
0.919
GAT85577.1
ABC transporter.
 
   
 
0.919
GAT88494.1
Hypothetical protein; Belongs to the ABC transporter superfamily.
 
   
 
0.894
GAT89301.1
Sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
   
 
0.875
GAT86656.1
Multidrug ABC transporter ATP-binding protein.
 
    
0.823
GAT87470.1
FAD-binding protein.
 
 
   0.769
GAT88134.1
ABC transporter.
  
 
  0.757
GAT87715.1
ABC transporter.
 
   
 
0.732
metN
Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
   
 
0.723
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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