Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAT85472.1Diguanylate phosphodiesterase. (517 aa)    
Predicted Functional Partners:
GAT85486.1
Histidine kinase.
 
 0.980
GAT87846.1
Ammonium transporter.
 
      0.863
GAT85473.1
Hypothetical protein.
       0.773
GAT89351.1
Signal peptide protein.
 
 
0.718
GAT89025.1
Ammonium transporter.
 
      0.666
GAT85474.1
Hypothetical protein.
       0.576
GAT88083.1
Diguanylate cyclase.
 
 
0.499
GAT87349.1
Hypothetical protein.
 
 
0.498
GAT88853.1
Signal peptide protein.
 
  
0.473
GAT85475.1
Histidine kinase.
      0.419
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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