Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GAT86711.1acyl-CoA thioesterase; Belongs to the CoA-transferase III family. (468 aa)    
Predicted Functional Partners:
GAT86712.1
DEAD/DEAH box helicase.
       0.757
GAT86709.1
Alpha/beta hydrolase.
    
  0.730
GAT86710.1
N-acetyltransferase GCN5.
       0.682
tam
Hypothetical protein; Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate.
       0.544
GAT88162.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.511
GAT86501.1
Succinate dehydrogenase.
     
  0.478
GAT88787.1
Malonic semialdehyde reductase.
  
 
  0.459
GAT85467.1
enoyl-CoA hydratase.
  
 
 0.452
GAT86663.1
Acetolactate synthase; Belongs to the TPP enzyme family.
  
 
  0.409
GAT87549.1
Acetolactate synthase; Belongs to the TPP enzyme family.
  
 
  0.409
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.