Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GAT86744.1ArsR family transcriptional regulator. (276 aa)    
Predicted Functional Partners:
GAT86745.1
Fe-S cluster assembly protein SufB.
  
  
 0.968
GAT86746.1
ABC transporter permease.
  
  
 0.917
GAT86748.1
Iron ABC transporter ATP-binding protein.
  
  
 0.814
GAT86749.1
Metal-sulfur cluster biosynthetic enzyme.
     
 0.748
GAT86747.1
Dioxygenase.
       0.727
GAT87134.1
Transcriptional regulator.
   
    0.688
GAT86742.1
ABC transporter.
 
     0.687
GAT88978.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
   
    0.684
GAT87103.1
NAD-dependent deacetylase.
   
    0.682
GAT89238.1
MarR family transcriptional regulator.
   
    0.671
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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