Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GAT85486.1Histidine kinase. (1124 aa)    
Predicted Functional Partners:
GAT85485.1
Diguanylate cyclase.
 
0.999
GAT86579.1
Putative two-component histidine kinase.
 
 0.994
GAT85517.1
Hypothetical protein.
 
 0.992
GAT89351.1
Signal peptide protein.
 
 
 0.992
GAT86276.1
Hypothetical protein.
 
 0.992
GAT87701.1
Transcriptional regulator.
 
 0.991
GAT87634.1
Transcriptional regulator.
 
 0.990
GAT86646.1
Histidine kinase.
 
0.989
GAT86645.1
Chemotaxis protein CheY.
 
0.988
GAT88578.1
PhoB family transcriptional regulator.
 
0.988
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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