Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GAT86867.1Hypothetical protein; Belongs to the HesB/IscA family. (129 aa)    
Predicted Functional Partners:
GAT86399.1
Nitrogen fixation protein NifU.
 
 
 0.970
GAT85714.1
Folate-binding protein YgfZ; Belongs to the GcvT family.
 
 0.946
GAT85986.1
Cysteine desulfarase.
 
 
 0.933
GAT86199.1
Cysteine desulfarase.
 
 
 0.933
GAT85920.1
Sodium:proton antiporter; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
 
 
 0.840
GAT85493.1
Ferredoxin.
  
 0.792
GAT87554.1
Ferredoxin.
  
 0.792
GAT89224.1
Oxidoreductase.
  
 0.792
GAT86093.1
Alpha-ketoglutarate decarboxylase.
  
  
 0.775
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 
  0.738
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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