| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GAT87080.1 | def-2 | CVCC1112_1739 | CVCC1112_1737 | Hypothetical protein. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.773 |
| def-2 | GAT87080.1 | CVCC1112_1737 | CVCC1112_1739 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Hypothetical protein. | 0.773 |
| def-2 | rplI | CVCC1112_1737 | CVCC1112_1915 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 50S ribosomal protein L9; Binds to the 23S rRNA. | 0.783 |
| def-2 | rplR | CVCC1112_1737 | CVCC1112_422 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.796 |
| def-2 | rplT | CVCC1112_1737 | CVCC1112_3196 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.854 |
| def-2 | rplV | CVCC1112_1737 | CVCC1112_412 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.794 |
| def-2 | rplX | CVCC1112_1737 | CVCC1112_418 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.783 |
| def-2 | rpmA | CVCC1112_1737 | CVCC1112_1679 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.774 |
| def-2 | rpmG | CVCC1112_1737 | CVCC1112_4448 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. | 0.784 |
| def-2 | rpsP | CVCC1112_1737 | CVCC1112_3675 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.777 |
| def-2 | tig | CVCC1112_1737 | CVCC1112_1699 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.802 |
| rplI | def-2 | CVCC1112_1915 | CVCC1112_1737 | 50S ribosomal protein L9; Binds to the 23S rRNA. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.783 |
| rplI | rplR | CVCC1112_1915 | CVCC1112_422 | 50S ribosomal protein L9; Binds to the 23S rRNA. | 50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.994 |
| rplI | rplT | CVCC1112_1915 | CVCC1112_3196 | 50S ribosomal protein L9; Binds to the 23S rRNA. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.996 |
| rplI | rplV | CVCC1112_1915 | CVCC1112_412 | 50S ribosomal protein L9; Binds to the 23S rRNA. | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.992 |
| rplI | rplX | CVCC1112_1915 | CVCC1112_418 | 50S ribosomal protein L9; Binds to the 23S rRNA. | 50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.991 |
| rplI | rpmA | CVCC1112_1915 | CVCC1112_1679 | 50S ribosomal protein L9; Binds to the 23S rRNA. | 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.991 |
| rplI | rpmG | CVCC1112_1915 | CVCC1112_4448 | 50S ribosomal protein L9; Binds to the 23S rRNA. | 50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. | 0.982 |
| rplI | rpsP | CVCC1112_1915 | CVCC1112_3675 | 50S ribosomal protein L9; Binds to the 23S rRNA. | 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.988 |
| rplI | tig | CVCC1112_1915 | CVCC1112_1699 | 50S ribosomal protein L9; Binds to the 23S rRNA. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.979 |
