Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GAT87136.1FAD-binding protein. (415 aa)    
Predicted Functional Partners:
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
 
  
  0.916
GAT85663.1
Beta-galactosidase.
    
  0.802
GAT87713.1
ROK family transcriptional regulator.
     
  0.800
GAT88027.1
alpha-N-arabinofuranosidase.
     
  0.800
GAT88686.1
Glucokinase.
     
  0.800
GAT89169.1
alpha-N-arabinofuranosidase.
     
  0.800
GAT86299.1
Glucokinase.
     
  0.800
GAT86857.1
Cystathionine beta-lyase.
    
  0.770
GAT85409.1
Lactate dehydrogenase.
  
 0.557
GAT87135.1
LacI family transcription regulator.
       0.535
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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