STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT85358.1Glycosyl transferase. (772 aa)    
Predicted Functional Partners:
GAT87175.1
Peptidoglycan glycosyltransferase.
 
 
 0.970
GAT88668.1
Peptidoglycan glycosyltransferase.
 
 
 0.966
GAT88663.1
Cell division protein FtsW; Belongs to the SEDS family.
  
 
 0.900
GAT87232.1
Penicillin-binding protein.
 
 
 0.897
GAT88654.1
Cell division protein.
   
 
 0.853
GAT85912.1
Hypothetical protein.
   
 
 0.830
murG
UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
  
 
 0.828
GAT87174.1
Cell division protein; Belongs to the SEDS family.
  
 
 0.807
GAT85357.1
Metallophosphoesterase.
       0.800
GAT88743.1
D-alanyl-D-alanine carboxypeptidase.
     
 0.780
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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