STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT87147.1ABC transporter ATP-binding protein. (273 aa)    
Predicted Functional Partners:
GAT87146.1
ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.998
GAT87148.1
Zinc ABC transporter substrate-binding protein.
 
 0.990
GAT89775.1
Iron ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.989
GAT89390.1
Iron ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.988
GAT89751.1
Iron ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.988
GAT89774.1
ABC transporter substrate-binding protein.
 
 0.953
GAT89750.1
ABC transporter substrate-binding protein.
 
 0.896
GAT89752.1
Iron-enterobactin transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.890
GAT89776.1
Enterobactin ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.886
GAT89391.1
Iron-enterobactin transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.885
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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