Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAT87159.1Putrescine oxidase. (457 aa)    
Predicted Functional Partners:
GAT88914.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.956
GAT89497.1
Hydrolase.
    
 0.922
GAT87158.1
Universal stress protein UspA.
 
     0.879
GAT87157.1
Large neutral amino acids transporter small subunit 2.
 
     0.861
GAT87569.1
Helicase.
    
 0.855
GAT85405.1
Acetoin utilization protein AcuC.
    
 0.803
GAT87160.1
TetR family transcriptional regulator.
 
     0.796
GAT89499.1
Large neutral amino acids transporter small subunit 2.
 
     0.716
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
     
  0.645
GAT89645.1
Succinate-semialdehyde dehydrogenase.
 
  
 0.642
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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