Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAT87165.1FAD-linked oxidase. (498 aa)    
Predicted Functional Partners:
GAT86857.1
Cystathionine beta-lyase.
    
  0.770
GAT88207.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.650
GAT87935.1
Glyoxylate carboligase; Belongs to the TPP enzyme family.
     
  0.614
GAT85409.1
Lactate dehydrogenase.
  
 0.603
GAT88837.1
Electron transfer flavoprotein subunit alpha.
 
   0.597
GAT87166.1
Peptide ABC transporter substrate-binding protein.
       0.590
GAT87167.1
ABC transporter permease.
       0.590
GAT87168.1
Peptide ABC transporter permease.
       0.590
GAT85976.1
Electron transfer flavoprotein subunit alpha.
 
   0.587
GAT88836.1
Electron transfer flavoprotein subunit beta.
 
   0.578
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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