Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GAT87291.1GntR family transcriptional regulator. (218 aa)    
Predicted Functional Partners:
GAT87290.1
Transketolase.
     0.794
GAT89696.1
GntR family transcriptional regulator.
  
    0.778
GAT88710.1
GntR family transcriptional regulator.
  
     0.774
GAT89530.1
GntR family transcriptional regulator.
  
     0.773
GAT88299.1
GntR family transcriptional regulator.
  
    0.767
GAT87164.1
GntR family transcriptional regulator.
  
    0.762
GAT85610.1
GntR family transcriptional regulator.
  
    0.755
GAT89095.1
GntR family transcriptional regulator.
  
     0.730
GAT85410.1
GntR family transcriptional regulator.
  
    0.712
GAT87289.1
Transketolase.
 
     0.694
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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