Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAT87309.1Carbonate dehydratase. (770 aa)    
Predicted Functional Partners:
GAT87310.1
Hypothetical protein.
 
 0.988
GAT87311.1
Metal-sensitive transcriptional repressor.
 
  
 0.744
GAT85486.1
Histidine kinase.
  
  
 0.611
GAT87532.1
Cation-transporting ATPase.
   
 0.611
GAT88976.1
Hypothetical protein.
  
 
 0.584
GAT87531.1
Membrane protein.
   
 0.573
GAT88188.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
    0.465
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
 
     0.447
GAT86945.1
ATPase AAA.
 
     0.435
GAT87793.1
Hypothetical protein M707_21210; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
 
  
 0.434
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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