STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GAT85537.1Polyprenyl glycosylphosphotransferase. (481 aa)    
Predicted Functional Partners:
GAT85544.1
Chromosome partitioning protein.
 
  
 0.950
GAT85482.1
Hypothetical protein.
 
 
 0.911
GAT86807.1
Bifunctional dTDP-4-keto-L-rhamnose reductase/dTDP-4-keto-6-deoxyglucose-3,5-epimerase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
  
 0.849
GAT86805.1
Hypothetical protein.
 
 0.839
GAT85535.1
Hypothetical protein.
 
    0.790
GAT86804.1
Hypothetical protein.
  
 
 0.788
GAT85538.1
Group 1 glycosyl transferase.
 
 
  0.755
GAT86795.1
Glutamine--scyllo-inositol aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 0.722
GAT89321.1
Hypothetical protein.
  
  
 0.712
GAT86033.1
Aminotransferase DegT; Belongs to the DegT/DnrJ/EryC1 family.
 
 0.712
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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