Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAT87328.1Glycosyl transferase. (82 aa)    
Predicted Functional Partners:
GAT87329.1
Glycosyl transferase.
 
     0.944
GAT86421.1
Membrane protein.
  
 0.620
GAT85479.1
Hypothetical protein.
  
  
  0.577
GAT85482.1
Hypothetical protein.
 
 
 0.554
GAT85913.1
Membrane protein.
   
  0.538
GAT87698.1
Dolichyl-phosphate beta-glucosyltransferase.
 
 
  0.511
GAT87326.1
Epimerase.
  
 
  0.470
GAT86041.1
Glycosyl transferase.
  
     0.465
GAT87327.1
Membrane protein.
       0.445
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
 
 0.443
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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