Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
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[Homology]
Score
GAT87348.1Cupin. (131 aa)    
Predicted Functional Partners:
GAT87347.1
Hypothetical protein.
 
    0.773
GAT87346.1
Hypothetical protein.
 
     0.632
GAT88844.1
Alpha/beta hydrolase.
  
  
  0.576
GAT87349.1
Hypothetical protein.
       0.516
GAT86690.1
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
    
  0.505
GAT89509.1
Amidohydrolase.
    
  0.505
GAT87362.1
4-carboxymuconolactone decarboxylase.
 
  
 0.447
GAT87360.1
3-carboxy-cis,cis-muconate cycloisomerase.
    
 0.427
GAT89116.1
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
 0.427
GAT87350.1
Glycosyl hydrolase.
 
     0.418
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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