Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAT87368.1Endoribonuclease L-PSP. (132 aa)    
Predicted Functional Partners:
GAT87373.1
salicylyl-CoA 5-hydroxylase.
 
    0.851
GAT87372.1
AMP-dependent synthetase.
 
    0.834
GAT87370.1
Cupin.
 
     0.815
GAT87367.1
Hypothetical protein.
       0.645
GAT89660.1
PaaX family transcriptional regulator.
 
     0.641
GAT87330.1
Endoribonuclease L-PSP.
  
     0.639
GAT89099.1
2-oxo-hept-3-ene-1,7-dioate hydratase.
    
 0.609
GAT86463.1
Threonine dehydratase.
 
 0.601
GAT87398.1
Threonine dehydratase.
 
 0.592
GAT87371.1
acyl-CoA thioesterase.
 
     0.567
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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