Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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[Homology]
Score
GAT87374.1Major facilitator transporter. (453 aa)    
Predicted Functional Partners:
GAT87373.1
salicylyl-CoA 5-hydroxylase.
  
    0.774
GAT87372.1
AMP-dependent synthetase.
       0.737
GAT87370.1
Cupin.
 
     0.608
GAT87375.1
Integrase core domain protein.
       0.590
GAT87371.1
acyl-CoA thioesterase.
       0.543
GAT87369.1
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase.
       0.467
GAT87368.1
Endoribonuclease L-PSP.
 
     0.435
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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