Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GAT87421.1Hypothetical protein. (382 aa)    
Predicted Functional Partners:
GAT87713.1
ROK family transcriptional regulator.
 
     0.786
GAT86299.1
Glucokinase.
  
     0.775
GAT88645.1
Polyphosphate glucokinase.
  
     0.709
GAT87420.1
Hypothetical protein.
       0.572
GAT88506.1
Kojibiose phosphorylase.
    
 0.572
GAT89337.1
Kojibiose phosphorylase.
    
 0.572
GAT87422.1
Hypothetical protein.
       0.533
GAT86139.1
N-acetylglucosamine 6-phosphate deacetylase.
 
 
 0.522
GAT87423.1
Hypothetical protein; Belongs to the type-B carboxylesterase/lipase family.
       0.517
nanE
N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
  
 
 0.446
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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