Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GAT85657.1 | GAT87472.1 | CVCC1112_317 | CVCC1112_2131 | Cysteine synthase. | Hypothetical protein. | 0.679 |
GAT85657.1 | GAT87872.1 | CVCC1112_317 | CVCC1112_2531 | Cysteine synthase. | Pyridoxal-5'-phosphate-dependent protein subunit beta. | 0.780 |
GAT85657.1 | GAT88205.1 | CVCC1112_317 | CVCC1112_2864 | Cysteine synthase. | Glutamate synthase. | 0.629 |
GAT87472.1 | GAT85657.1 | CVCC1112_2131 | CVCC1112_317 | Hypothetical protein. | Cysteine synthase. | 0.679 |
GAT87472.1 | GAT87872.1 | CVCC1112_2131 | CVCC1112_2531 | Hypothetical protein. | Pyridoxal-5'-phosphate-dependent protein subunit beta. | 0.679 |
GAT87472.1 | GAT88205.1 | CVCC1112_2131 | CVCC1112_2864 | Hypothetical protein. | Glutamate synthase. | 0.544 |
GAT87872.1 | GAT85657.1 | CVCC1112_2531 | CVCC1112_317 | Pyridoxal-5'-phosphate-dependent protein subunit beta. | Cysteine synthase. | 0.780 |
GAT87872.1 | GAT87472.1 | CVCC1112_2531 | CVCC1112_2131 | Pyridoxal-5'-phosphate-dependent protein subunit beta. | Hypothetical protein. | 0.679 |
GAT87872.1 | GAT88205.1 | CVCC1112_2531 | CVCC1112_2864 | Pyridoxal-5'-phosphate-dependent protein subunit beta. | Glutamate synthase. | 0.629 |
GAT88205.1 | GAT85657.1 | CVCC1112_2864 | CVCC1112_317 | Glutamate synthase. | Cysteine synthase. | 0.629 |
GAT88205.1 | GAT87472.1 | CVCC1112_2864 | CVCC1112_2131 | Glutamate synthase. | Hypothetical protein. | 0.544 |
GAT88205.1 | GAT87872.1 | CVCC1112_2864 | CVCC1112_2531 | Glutamate synthase. | Pyridoxal-5'-phosphate-dependent protein subunit beta. | 0.629 |