Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
GAT87545.1Cupin. (174 aa)    
Predicted Functional Partners:
GAT87543.1
Hypothetical protein.
 
     0.875
GAT87550.1
Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
  0.804
GAT87546.1
3-phenylpropionate dioxygenase.
 
   
 0.802
GAT87553.1
Extradiol ring-cleavage dioxygenase.
 
    0.797
GAT87549.1
Acetolactate synthase; Belongs to the TPP enzyme family.
 
     0.782
GAT87552.1
Alpha/beta hydrolase.
  
  
  0.744
GAT87551.1
Short-chain dehydrogenase.
  
  
  0.722
GAT87544.1
Hypothetical protein.
 
    0.698
GAT89647.1
Oxidoreductase.
 
    0.657
GAT87555.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
    0.571
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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