Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAT87763.1CoA transferase; Belongs to the CoA-transferase III family. (408 aa)    
Predicted Functional Partners:
GAT87762.1
Amidohydrolase.
       0.718
GAT87764.1
Hypothetical protein.
 
     0.715
GAT87761.1
Membrane protein.
       0.583
GAT88502.1
hydroxymethylglutaryl-CoA lyase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
  0.526
trpD
Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
 
      0.514
GAT88162.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.511
GAT87760.1
Membrane protein.
       0.506
GAT86501.1
Succinate dehydrogenase.
     
  0.478
GAT85467.1
enoyl-CoA hydratase.
  
 
 0.452
GAT87759.1
Amidase; Belongs to the amidase family.
    
  0.414
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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