Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GAT87934.1Tartronate semialdehyde reductase. (292 aa)    
Predicted Functional Partners:
GAT87933.1
Hydroxypyruvate isomerase; Belongs to the hyi family.
 
 0.991
GAT87935.1
Glyoxylate carboligase; Belongs to the TPP enzyme family.
 
 
 0.991
GAT87936.1
Glycerate kinase; Belongs to the glycerate kinase type-1 family.
  
 
  0.977
GAT87119.1
Glycerate kinase; Belongs to the glycerate kinase type-1 family.
  
 
  0.961
GAT89363.1
Hydroxypyruvate isomerase; Belongs to the hyi family.
 
 
 0.939
GAT88301.1
Hypothetical protein.
  
 0.927
GAT87096.1
2-hydroxy-3-oxopropionate reductase.
  
  
 
0.917
GAT89233.1
3-hydroxyisobutyryl-CoA hydrolase.
 
 
 
  0.785
GAT87937.1
Allantoicase.
  
 
  0.721
GAT89100.1
alpha-dehydro-beta-deoxy-D-glucarate aldolase; Belongs to the HpcH/HpaI aldolase family.
  
 
  0.713
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.