STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT87935.1Glyoxylate carboligase; Belongs to the TPP enzyme family. (588 aa)    
Predicted Functional Partners:
GAT87933.1
Hydroxypyruvate isomerase; Belongs to the hyi family.
 
 
 0.982
GAT87934.1
Tartronate semialdehyde reductase.
 
 
 0.947
GAT89363.1
Hydroxypyruvate isomerase; Belongs to the hyi family.
  
 
 0.921
GAT88302.1
Oxidoreductase.
 
 
 0.853
glcB
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
    
 0.832
GAT87096.1
2-hydroxy-3-oxopropionate reductase.
 
 
 0.830
GAT89234.1
3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.
  
 
 0.808
GAT87952.1
Isocitrate lyase.
     
 0.805
GAT88375.1
Isocitrate lyase.
     
 0.805
GAT87937.1
Allantoicase.
 
  
 0.801
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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