Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GAT87940.1Chemotaxis protein CheY. (372 aa)    
Predicted Functional Partners:
GAT85486.1
Histidine kinase.
 
  
 0.984
GAT87943.1
Anti-sigma regulatory factor, serine/threonine protein kinase.
  
 
 0.971
GAT87942.1
Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.966
GAT87777.1
Histidine kinase.
  
 0.891
GAT87668.1
Hypothetical protein.
  
 
 0.862
GAT86646.1
Histidine kinase.
  
 0.853
GAT85475.1
Histidine kinase.
 
   
 0.831
GAT87941.1
Cellulose synthase.
 
    0.788
GAT88981.1
Histidine kinase.
 
   
 0.785
GAT89743.1
Histidine kinase.
 
   
 0.785
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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