Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAT87942.1Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family. (110 aa)    
Predicted Functional Partners:
GAT87943.1
Anti-sigma regulatory factor, serine/threonine protein kinase.
  
 
 0.993
GAT87940.1
Chemotaxis protein CheY.
 
 
 0.966
GAT85486.1
Histidine kinase.
 
  
 0.940
GAT87941.1
Cellulose synthase.
 
    0.940
GAT87389.1
ABC transporter.
     
  0.725
GAT86098.1
ABC transporter permease.
    
  0.718
GAT86541.1
Phosphonate ABC transporter substrate-binding protein.
     
  0.717
GAT89183.1
Phosphate ABC transporter substrate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.
     
  0.717
GAT89301.1
Sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
     
  0.717
GAT85878.1
Betaine/glycine ABC transporter substrate-binding protein.
     
  0.717
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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