Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAT85602.1Alkanal monooxygenase. (360 aa)    
Predicted Functional Partners:
GAT85601.1
Deaminase/reductase.
       0.773
GAT87277.1
NADPH-dependent FMN reductase.
  
  0.655
GAT89133.1
FMN reductase.
  
  0.590
GAT89676.1
NADPH-dependent FMN reductase.
  
  0.590
GAT85713.1
Flavodoxin.
     
  0.560
GAT88522.1
Amino acid adenylation protein.
    
  0.558
GAT87225.1
3-beta hydroxysteroid dehydrogenase.
     
  0.557
GAT85687.1
Taurine dioxygenase.
  
 
 0.552
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
    
  0.540
GAT85600.1
Hypothetical protein.
       0.525
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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