Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAT88029.1Sugar ABC transporter permease. (310 aa)    
Predicted Functional Partners:
GAT88028.1
Sugar ABC transporter permease.
  0.984
GAT88030.1
Carbohydrate-binding protein.
 
  0.979
GAT89301.1
Sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.964
GAT85568.1
Sugar ABC transporter permease.
 
  0.939
GAT89285.1
Sugar ABC transporter permease.
 
 0.938
GAT85775.1
Glycerol-3-phosphate ABC transporter permease.
 
  0.933
GAT89815.1
Glycerol-3-phosphate ABC transporter permease.
 
  0.932
GAT85367.1
Sugar ABC transporter permease.
 
  0.931
GAT85421.1
Sugar ABC transporter permease.
 
  0.930
GAT89631.1
ABC transporter permease.
 
  0.917
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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