STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT88038.1Glutathione peroxidase; Belongs to the glutathione peroxidase family. (160 aa)    
Predicted Functional Partners:
GAT87911.1
Gamma-glutamyltransferase.
     
 0.910
GAT86723.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 0.860
GAT88121.1
Dihydrolipoamide dehydrogenase.
  
 0.843
GAT87382.1
Hypothetical protein.
   
 0.758
GAT87710.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
  
 0.701
GAT89741.1
Gluconolactonase.
 
 
 
  0.677
GAT85634.1
Catalase; Belongs to the catalase family.
  
 
 0.639
GAT86977.1
Glutaredoxin.
  
 0.628
GAT89638.1
NADH:flavin oxidoreductase.
  
 0.628
GAT86996.1
Glutaredoxin.
  
 0.581
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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