STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT88137.1Glyoxalase. (127 aa)    
Predicted Functional Partners:
GAT88136.1
Methyltransferase type 12.
 
 
  0.653
GAT87377.1
Hypothetical protein.
  
     0.540
GAT87695.1
Glyoxalase.
  
 
  0.531
GAT85493.1
Ferredoxin.
    
  0.527
GAT87554.1
Ferredoxin.
    
  0.527
GAT89224.1
Oxidoreductase.
    
  0.527
GAT89546.1
N-acetyltransferase GCN5.
  
    0.505
GAT89208.1
Mitomycin radical oxidase.
  
  
  0.455
GAT87011.1
Cupin.
  
     0.445
GAT85409.1
Lactate dehydrogenase.
    
  0.432
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.