Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAT88153.1Potassium transporter TrkA. (224 aa)    
Predicted Functional Partners:
GAT88152.1
Potassium transporter TrkA.
 
  
 0.961
GAT88154.1
DNA-binding protein.
 
     0.885
GAT85523.1
Potassium transporter Trk.
  
 0.834
GAT85402.1
Potassium transporter Trk.
  
 0.834
GAT88185.1
rRNA cytosine-C5-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
   0.640
GAT88155.1
SAM-dependent methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
       0.628
GAT88572.1
Molybdenum cofactor biosynthesis protein MoaE.
   
    0.565
GAT88156.1
Aconitate hydratase.
       0.470
GAT89053.1
IclR family transcriptional regulator.
  
     0.451
GAT88478.1
Selenocysteine synthase.
   
    0.428
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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