Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAT88173.1Cysteine desufuration protein SufE. (158 aa)    
Predicted Functional Partners:
GAT88174.1
Thiosulfate sulfurtransferase.
 
  
  0.947
GAT86400.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 0.839
GAT88351.1
Hypothetical protein.
  
 0.839
GAT89397.1
Hypothetical protein.
  
 0.839
GAT89408.1
Cysteine desulfurase.
  
 0.839
GAT86081.1
Cysteine desulfurase.
  
 0.839
GAT85942.1
Molybdopterin biosynthesis MoeZ.
     
 0.803
GAT85986.1
Cysteine desulfarase.
    
 0.745
GAT86199.1
Cysteine desulfarase.
    
 0.745
GAT88172.1
prolyl-tRNA synthetase; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.
       0.743
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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