Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GAT88299.1GntR family transcriptional regulator. (233 aa)    
Predicted Functional Partners:
GAT88301.1
Hypothetical protein.
     0.843
GAT87566.1
GntR family transcriptional regulator.
  
    0.771
GAT86631.1
GntR family transcriptional regulator.
  
    0.770
GAT87291.1
GntR family transcriptional regulator.
  
    0.767
GAT89298.1
GntR family transcriptional regulator.
  
    0.767
GAT88088.1
GntR family transcriptional regulator.
  
    0.754
GAT87141.1
GntR family transcriptional regulator.
  
    0.744
GAT88283.1
Regulatory protein GntR, HTH.
  
    0.743
GAT88710.1
GntR family transcriptional regulator.
  
    0.739
GAT89443.1
GntR family transcriptional regulator.
  
    0.718
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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