Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAT85644.1Voltage-gated potassium channel. (238 aa)    
Predicted Functional Partners:
GAT85523.1
Potassium transporter Trk.
  
 0.834
GAT85402.1
Potassium transporter Trk.
  
 0.834
GAT88185.1
rRNA cytosine-C5-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
   0.640
GAT88572.1
Molybdenum cofactor biosynthesis protein MoaE.
   
    0.565
GAT85645.1
Hypothetical protein.
       0.539
GAT88478.1
Selenocysteine synthase.
   
    0.428
GAT86371.1
Uroporphyrinogen III synthetase.
  
    0.416
GAT87380.1
Integration host factor; Belongs to the bacterial histone-like protein family.
    
   0.411
GAT85951.1
uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
    0.406
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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