STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GAT85666.1ABC transporter substrate-binding protein. (444 aa)    
Predicted Functional Partners:
GAT85665.1
Sugar ABC transporter permease.
 
  0.995
GAT85664.1
Sugar ABC transporter permease.
 
  0.991
GAT89301.1
Sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.966
GAT89284.1
Maltose ABC transporter permease.
 
  0.891
GAT85663.1
Beta-galactosidase.
 
     0.845
GAT89283.1
Periplasmic maltose-binding protein.
  
  
  0.838
GAT88029.1
Sugar ABC transporter permease.
  
  0.823
GAT89332.1
Sugar ABC transporter permease.
  
  0.821
GAT88888.1
Sugar ABC transporter substrate-binding protein.
  
  
  0.819
GAT89138.1
ABC transporter substrate-binding protein.
  
  
  0.817
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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