Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GAT88605.1Multidrug ABC transporter ATPase. (258 aa)    
Predicted Functional Partners:
GAT88606.1
Antibiotic ABC transporter permease.
 
 0.988
metN
Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
  
 
0.883
GAT88466.1
Polar amino acid ABC transporter inner membrane protein.
   
  0.836
GAT88607.1
TetR family transcriptional regulator.
 
     0.816
GAT86535.1
ABC transporter.
 
  
 
0.689
GAT88467.1
Hypothetical protein.
    
  0.689
GAT87389.1
ABC transporter.
    
  0.688
GAT86472.1
Branched-chain amino acid ABC transporter ATP-binding protein.
  
 
0.619
GAT88134.1
ABC transporter.
     
  0.615
GAT85594.1
Sulfate ABC transporter ATP-binding protein.
 
  
 
0.593
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.