Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAT88624.1MaoC family dehydratase. (164 aa)    
Predicted Functional Partners:
GAT88623.1
Citrate lyase subunit beta; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.969
GAT88627.1
acyl-CoA dehydrogenase.
 
 0.815
GAT88162.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.796
GAT88626.1
succinyl-CoA:3-ketoacid-CoA transferase.
     
 0.794
GAT88625.1
succinyl-CoA:3-ketoacid-CoA transferase.
  
    0.783
GAT88628.1
Biotin carboxyl carrier protein.
 
  
 0.743
GAT88631.1
TetR family transcriptional regulator.
 
     0.658
GAT89003.1
3-oxoacyl-ACP synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
     
 0.648
GAT89000.1
ACP S-malonyltransferase.
     
 0.640
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
    
 0.618
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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