Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GAT88627.1acyl-CoA dehydrogenase. (387 aa)    
Predicted Functional Partners:
GAT88837.1
Electron transfer flavoprotein subunit alpha.
 0.991
GAT89235.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.983
GAT88162.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.952
GAT85975.1
Electron transfer flavoprotein subunit beta.
 0.932
GAT85976.1
Electron transfer flavoprotein subunit alpha.
 0.930
GAT88836.1
Electron transfer flavoprotein subunit beta.
 
 0.927
GAT85551.1
Branched-chain alpha-keto acid dehydrogenase subunit E2.
   
  0.926
GAT89123.1
Branched-chain alpha-keto acid dehydrogenase subunit E2.
   
  0.926
GAT86233.1
Dihydrolipoamide acyltransferase.
   
  0.926
GAT88628.1
Biotin carboxyl carrier protein.
  
 0.857
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
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