Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GAT85674.1Transcriptional regulator. (224 aa)    
Predicted Functional Partners:
GAT85673.1
Histidine kinase.
 0.997
GAT85486.1
Histidine kinase.
 
0.987
GAT85518.1
Histidine kinase.
 0.986
GAT85517.1
Hypothetical protein.
  
  
 
0.902
GAT86277.1
Hypothetical protein.
 
 0.888
GAT86579.1
Putative two-component histidine kinase.
 
 0.868
GAT86646.1
Histidine kinase.
 0.866
GAT87777.1
Histidine kinase.
  0.863
GAT88981.1
Histidine kinase.
 
 0.853
GAT85475.1
Histidine kinase.
  
  0.849
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.