Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GAT88711.12-methylcitrate dehydratase. (506 aa)    
Predicted Functional Partners:
GAT88713.1
Citrate synthase; Belongs to the citrate synthase family.
 
 
 0.999
GAT88712.1
2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate.
 
 
 0.995
GAT88156.1
Aconitate hydratase.
  
 
 0.976
GAT85900.1
Type II citrate synthase; Belongs to the citrate synthase family.
  
 
 0.932
GAT89128.1
Carboxyvinyl-carboxyphosphonate phosphorylmutase.
 
 
 0.872
GAT87344.1
Phosphonomutase.
  
 
 0.855
GAT88710.1
GntR family transcriptional regulator.
       0.767
GAT87952.1
Isocitrate lyase.
     
 0.649
GAT88375.1
Isocitrate lyase.
     
 0.649
GAT86619.1
Hypothetical protein.
     
 0.619
Your Current Organism:
Paenarthrobacter nicotinovorans
NCBI taxonomy Id: 29320
Other names: ATCC 49919, Arthrobacter nicotinivorans, Arthrobacter nicotinovorans, Arthrobacter oxydans DSM 420, CIP 106990, DSM 420, IFO 15511, JCM 3874, LMG 16253, LMG:16253, NBRC 15511, P. nicotinovorans
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.